Installing breakdancer.sourceforge.net

http://breakdancer.sourceforge.net/moreperl.html

Dependencies for breakdancer-1.1_2011_02_21

sudo perl -MCPAN -e 'install Statistics::Descriptive'
sudo perl -MCPAN -e 'install Math::CDF'  

sudo perl -MCPAN -e 'install GD::Graph::histogram'

#if you haven't done it already, install samtools and add the binary to your path bam2cfg.pl needs to call it.